Package: hipecR 2.0.0

hipecR: Tools for Analysing HIPEC Patient Data

Provides helper functions for analysing patient data in hyperthermic intraperitoneal chemotherapy (HIPEC) workflows. Includes functions to estimate peritoneal surface area (PSA), summarise registry data, and produce reporting graphics. Body surface area calculations are based on Du Bois and Du Bois (1916) <doi:10.1001/archinte.1916.00080130010002>.

Authors:Tarkan Jaeger [aut, cre]

hipecR_2.0.0.tar.gz
hipecR_2.0.0.zip(r-4.7)hipecR_2.0.0.zip(r-4.6)hipecR_2.0.0.zip(r-4.5)
hipecR_2.0.0.tgz(r-4.6-any)hipecR_2.0.0.tgz(r-4.5-any)
hipecR_2.0.0.tar.gz(r-4.7-any)hipecR_2.0.0.tar.gz(r-4.6-any)
hipecR_2.0.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
hipecR/json (API)
NEWS

# Install 'hipecR' in R:

install.packages('hipecR', repos = c('https://tarjae.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/tarjae/hipecr/issues

Pkgdown/docs site:https://tarjae.github.io

On CRAN:

3.18 score 2 scripts 190 downloads 30 exports 183 dependencies

Last updated from:e5fd1f6740. Checks:7 NOTE, 2 OK. Indexed: yes.

Target	Result	Time
linux-devel-x86_64	NOTE	247
source / vignettes	OK	230
linux-release-x86_64	NOTE	201
macos-release-arm64	NOTE	148
macos-oldrel-arm64	NOTE	177
windows-devel	NOTE	185
windows-release	NOTE	158
windows-oldrel	NOTE	152
wasm-release	OK	190

Exports:tar_age tar_animbar tar_bmi tar_bsa tar_cast_data tar_count_na tar_count_top tar_create_data tar_create_default_record tar_dateInput tar_delete_data tar_dgav_lookup tar_flag tar_footnote tar_get_next_id tar_get_table_metadata tar_ggplot_font_size tar_head_tail tar_impute_outlier tar_install tar_median_survival tar_oneline tar_print tar_psa tar_read_data tar_update_data tar_update_inputs tar_WellPanel tar_wsl_pfad tar_yes_no

Dependencies:abind AsioHeaders backports base64enc bit bit64 bookdown boot broom bslib cachem callr car carData chromote class classInt cli clipr codetools colorspace commonmark corrplot cowplot cpp11 crayon curl DBI Deriv digest dlookr doBy dplyr e1071 evaluate exactRankTests farver fastmap fontawesome forcats foreach forecast formatR Formula fracdiff fs generics gganimate ggplot2 ggpubr ggrepel ggsci ggsignif ggtext glmnet glue gridExtra gridtext gtable haven highr hms htmltools htmlwidgets httpuv isoband iterators jomo jpeg jquerylib jsonlite kableExtra KernSmooth knitr labeling labelled later lattice lifecycle litedown lme4 lmtest lpSolve magick magrittr markdown MASS Matrix MatrixModels maxstat memoise mgcv mice microbenchmark mime minqa mitml modelr mvtnorm nlme nloptr nnet numDeriv ordinal otel pagedown pan pbkrtest pillar pkgconfig png polynom prettyunits processx progress promises proxy ps purrr quantreg R6 rappdirs rbibutils RColorBrewer Rcpp RcppArmadillo RcppEigen Rdpack reactable reactR readr reformulas rlang rmarkdown rpart rstatix rstudioapi s2 S7 sass scales servr sf shape shiny shinyWidgets showtext showtextdb sourcetools SparseM stringi stringr survival survminer svglite sysfonts systemfonts textshaping tibble tidyr tidyselect timeDate tinytex transformr tweenr tzdb ucminf units urca utf8 vctrs viridisLite vroom webshot2 websocket withr wk xfun xml2 xtable yaml zip zoo

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
Calculate person age	tar_age
Create Animated Bar Chart	tar_animbar
Calculating BMI (kg/m^2)	tar_bmi
Body surface area calculator in m^2 (DuBois and DuBois formula)	tar_bsa
Cast registry data	tar_cast_data
NA counter	tar_count_na
Count Top Categories in a Factor	tar_count_top
Create registry record	tar_create_data
Create default registry record	tar_create_default_record
tar_dateinput	tar_dateInput
Delete registry record	tar_delete_data
Look-up function for DGAV registry IDs/names	tar_dgav_lookup
Create a combined flag plot	tar_flag
Add Footnote to Graph and Save as PNG	tar_footnote
Get next registry ID	tar_get_next_id
Registry field metadata	tar_get_table_metadata
Adjust Theme Sizes in ggplot2	tar_ggplot_font_size
Display both the head and tail of a dataframe or tibble	tar_head_tail
Imputates outliers and shows 4 different method plots	tar_impute_outlier
Short Installer	tar_install
Plot Survival Curves and Save with Median Annotations	tar_median_survival
tar_oneline	tar_oneline
Set Pillar Print Minimum	tar_print
Peritoneal Surface Area Calculation	tar_psa
Read registry data	tar_read_data
Update registry record	tar_update_data
Update Shiny inputs from record	tar_update_inputs
tar_WellPanel	tar_WellPanel
Convert a Windows Path to a WSL Path	tar_wsl_pfad
Convert "yes" and "no" to 1 and 0	tar_yes_no